BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A10SP1|AL428834
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1622 0.0
>3x_Contig1592
Length = 12307
Score = 1622 bits (817), Expect = 0.0
Identities = 856/865 (98%), Gaps = 4/865 (0%)
Strand = Plus / Minus
Query: 1 gatcaacccgtaag-catcatcttgttaaatttggtggaagtgaam-tcttgttttcc-t 57
|||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||| |
Sbjct: 9085 gatcaacccgtaaggcatcatcttgttaaatttgctgcaagtgaaactcttgttttccct 9026
Query: 58 tgaattttaatctcatcaagaacaatgagaatggtggaatcgcacccagtcccatggtta 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9025 tgaattttaatctcatcaagaacaatgagaatggtggaatcgcacccagtcccatggtta 8966
Query: 118 atctccaaacccattgtaatctgtgttcaccaaagatacaaataagaaccaatggcacaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8965 atctccaaacccattgtaatctgtgttcaccaaagatacaaataagaaccaatggcacaa 8906
Query: 178 cggctgcgataacgaaaccccaatcaatcatgaagtttgtgaaccaaacaaaccaacggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8905 cggctgcgataacgaaaccccaatcaatcatgaagtttgtgaaccaaacaaaccaacggt 8846
Query: 238 tcctcctctttgcgggcaataaagctgaagcttctgcagcagcagtagacccagcaggat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8845 tcctcctctttgcgggcaataaagctgaagcttctgcagcagcagtagacccagcaggat 8786
Query: 298 attcagatccgataccgacacctaaaaagaatctataagcagtgatagctgcaaatatac 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8785 attcagatccgataccgacacctaaaaagaatctataagcagtgatagctgcaaatatac 8726
Query: 358 caccagcttgagtcgttgtggtgccgacaccccaggcaccagcagcaaggatggaaaaca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8725 caccagcttgagtcgttgtggtgccgacaccccaggcaccagcagcaaggatggaaaaca 8666
Query: 418 caatcaagatgatgttacccatcaacattgccaatctacgagaatagtagtcagcaatgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8665 caatcaagatgatgttacccatcaacattgccaatctacgagaatagtagtcagcaatgt 8606
Query: 478 aaccgaa-gacaattgtcctaaaacgataccaacaaaagcaatagatgawacgttttgaa 536
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8605 aaccgaaggacaattgtcctaaaacgataccaacaaaagcaatagatgaaacgttttgaa 8546
Query: 537 tggcattcgaattcgagtactgatcaccataaatctgcgctaaacatgtggaaacggtac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8545 tggcattcgaattcgagtactgatcaccataaatctgcgctaaacatgtggaaacggtac 8486
Query: 597 caatggaagcgttgatataaccatcactgaataaaccggaccccgtagtgaagataggcc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8485 caatggaagcgttgatataaccatcactgaataaaccggaccccgtagtgaagataggcc 8426
Query: 657 agttaatgtgcaaatttgatctgaacgaggtctttgaaccactcttcttgccagaatcat 716
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8425 agtaaatgtgcaaatttgatctgaacgaggtctttgaaccactcttcttgccagaatcat 8366
Query: 717 cagcttttgccactaaactttcaccggtgctatcgaactcgttgactccaacgacaccat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8365 cagcttttgccactaaactttcaccggtgctatcgaactcgttgactccaacgacaccat 8306
Query: 777 cgttctcacttatctcttccgattcctctgtgacatcatacgttttgttccacgtgatct 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8305 cgttctcacttatctcttccgattcctctgtgacatcatacgttttgttccacgtgatct 8246
Query: 837 ctttgttaatttgtgataccaaatg 861
|||||||||||||||||||||||||
Sbjct: 8245 ctttgttaatttgtgataccaaatg 8221
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5729
Number of Sequences: 1807
Number of extensions: 5729
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)